Anopheles gambiae Primer List |
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AgOR1 |
AgOr1 5' |
CGCAAGCCCTATACTTCAAGG |
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KCRT3' |
TNCCATGCTCTGAAGTACGG |
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AgOR2 |
MBAC 5' |
CTNCAGCTCGGCGAACAGT |
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MBAC 3' 2 |
GCNACCTCCTTTCTCGTGAT |
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AgOR3 |
AgOR3 5' RT |
ATGCCTTCTGAGCGGCTTCG |
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AgOR3 3' RT |
CTAAAACTGCTCCTTCAGTA |
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AgOR4 |
AgOR4_597fwd |
GCTACCCGTCGTGGTTATGT |
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AgOR4_960rev |
CTGCGTCCCGAGTAAACAAT |
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AgOR6 |
AgOR6 5' |
GTTCACGGGCATCATCATC |
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AgOR6 3' |
GGTACCATTCGCAACCGTAA |
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AgOR7 |
AgOR7 6.2 |
TGCTGCTACACATGCTGAC |
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mrOR7rev |
ACTAGTTTACTTCAGCTGCACCAGCA |
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AgOR8 |
AgOR8.1 |
TTATGTGGTACTGGTACGAT |
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AgOR8.2 |
CGTAACATCACGAACAGCA |
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AgOR9 |
AgOR9 5' |
TTTCAGCAGCCACACAGCTA |
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AgOR9 3' |
TTGACTTCTTACGCGCACTC |
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AgOR10 |
AgOR10.1 |
CTCGTCTCAACGTACACTAA |
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AgOR10.2 |
GTGCCAGTAGAAGGCAAATA |
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AgOR11 |
AgOR11.1 |
GTCAGTCACAAAGCTACAAG |
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AgOR11.2 |
AAGTGCTTATCCTTCCCATC |
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AgOR12 |
AgOR12_760fwd |
CTCATCCAAATGCATCAGC |
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AgOR12_1180rev
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GCACGAGAAGAACGGTGTAAG |
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AgOR13 |
AgOR13 5' |
TGATCTGGAGCTCAATGCTG |
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AgOR13 3' |
TAAACGGTATGTGCCACACG |
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AgOr14 |
AgOr14 5' |
TGGTGTTTGATGATGCTTTTCT |
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AgOr14 3' |
AAAGAACGAGTAGGACTTATTAACCA |
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AgOr15 |
AgOr15.1 |
TACCTGATCTTCGGTATCGT |
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AgOr15.2 |
ACTGTTCCATGTTCATGTAG |
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AgOr16 |
AgOr16 5' |
AGCTTGTGCGACAGTCAGAA |
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AgOr16 3' |
TCGAACATGACCAATATAAACAGA |
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AgOr17 |
AgOr17 5' |
TCATTAGACATGTACGAACTTTCTCTC |
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AgOr17 3' |
ATAATCAGGCTAATAAAATTTAGATCG |
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AgOr18 |
AgOr18.3 |
ACGTTCGCCTTTACCCTCTA |
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AgOr18.4 |
CATGAAGCTGATGTGCTTAC |
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AgOr19 |
AgOr19 5' |
CTCATCCAAATGCATCAGC |
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AgOr19 3' |
TTAGCACGAGAAGAACGGTGT |
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AgOr20 |
AgOr20 5' |
GATCGAGAGTTGAAACAAGTGA |
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AgOr20revmr |
TGAAATCCTTCAGCACAATG |
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AgOr21 |
AgOr21.1 |
GTACTTCGGTGTATGGCTAT |
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AgOr21.2 |
CCGTAATTTGAAGCGGAGTT |
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AgOr22 |
AgOr22 5' |
GATTGTGTATCTGCGCCAAA |
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AgOr22 3' |
GGTGCAGGAAGGCGTTACA |
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AgOr23 |
AgOr23.1 |
ATCTGCATCTGTACAATGTG |
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AgOr23.2 |
GCACAGTTGATAAAGAGTTG |
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AgOr24 |
AgOr24 5' |
TTGCTACATTTGGATTTTGCTG |
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AgOr24 3' |
TTTCAACGTGAGAGCATTGG |
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AgOr25 |
AgOr25 5' |
GGAACGAAACGATCGAAATC |
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AgOr25 3' |
TGAAATAGGAGTAGCTGGCTTT |
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AgOr26 |
AgOr26.1 |
GGCAAAGAATGTCGACATTC |
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AgOr26.2 |
TGGCATACACAAGATTCCAT |
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AgOr27 |
AgOr27.1 |
TCAGTTATTGGTTTACTGGC |
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AgOr27.2 |
TTCGATCTGAAAGCTCGTTG |
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AgOr28 |
AgOr28 5' |
GCTGAAACAAATCATTTTGAAGC |
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AgOr28 3' |
TGCAGTAAGGTAAAGTAGGAGTAAGA |
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AgOr29 |
AgOr29 5' |
TGCAGCTTGATATGGTGTCTG |
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AgOr29 3' |
AGCGCCATCAGGACCTCT |
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AgOr30 |
AgOr30 5' |
TGGTGCCTCATGCTGTTCTA |
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AgOr30 3' |
CCTGGCAAGTTGCTGTAATTC |
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AgOr31 |
AgOr31.1 |
ATTATGCTGCTATGCGATTG |
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AgOr31.2 |
TACGTAGTATGTACTTGTGG |
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AgOr32 |
AgOr32 5' |
CCTACCACGGGTCAGCTATC |
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AgOr32 3' |
TGTACGATGCACTGGAACTAAGA |
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AgOr33 |
AgOr33 5' |
CTTCTTCGGCAACCGTGT |
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AgOr33 3' |
ATCGAGTAGGACCGGCTAAG |
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AgOr34 |
AgOr34.1 |
TTGCTTAGTGCTGAGTATCG |
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AgOr34.2 |
CGAGAAACATTTGCACGCTT |
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AgOr35 |
AgOr35.1 |
TTCCTGTTCAACTGTGACTC |
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AgOr35.2 |
TATGAAGCCACCTTTGGTGA |
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AgOr36 |
AgOR36fwdmr |
ACTCGATCATGATGGGACTG |
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AgOr36 3' |
GGCTGTAGAGCAGAATTCCAA |
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AgOr37 |
AgOr37.1 |
TATCTGTATCCGTACCTCGT |
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AgOr37.2 |
CAGCAACATACGCAACGTTT |
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AgOr38 |
AgOr38.1 |
TATCGGAACGGTAGTCTGAT |
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AgOr38.2 |
TTCAGCGTGTACTTGTCTAC |
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AgOr39 |
AgOr39.1 |
AAGGTGCTGATTGCCATCAA |
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AgOr39.2 |
CGCTTGAAACTGACCGTAAA |
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AgOr40 |
AgOr40 5' |
GAACTGTATCTGTACTGCTTTCTTGG |
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AgOr40 3' |
AATGATGGTGTAGTACGAGAAGG |
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AgOr41 |
AgOr41 5' |
CAGCATCCTTCGCAATCAG |
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AgOr41 3' |
GAAGACCGGTATCAACACCA |
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AgOr42 |
AgOr42 5' |
CGCGATCAGTTGGTGAAGAT |
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AgOr42 3' |
TATGAACAATCCTGGCAACC |
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AgOr43 |
AgOr43 5' |
AATCTGCAGCCATCTTTGGT |
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AgOr43 3' |
CACCTGAACCCAGTTGTTGA |
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AgOr44 |
AgOr44 5' |
AATCTGCAGCCGTCTATGGT |
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AgOr44 3' |
TCCTTTTTCTCAGAATGATCCA |
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AgOr45 |
AgOr45 5' |
GTGGCACTGCTGAACATCTG |
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AgOr45 3' |
ATAGGCCGCTCGGATGAT |
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AgOr46 |
AgOr46.2 |
CTCGATCTTGAGGACAATGA |
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AgOr46.1 |
TACATTTACTTGTGGGTGGC |
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AgOr47 |
AgOr47.1 |
ACTACTCGGAGTGAACAAGA |
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AgOr47.2 |
GATGTAGAGCGCAAAGAACA |
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AgOr48 |
AgOr48 5' |
TCGAGATGATGTGCTTCTCCT |
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AgOr48 3' |
TGATCATGTAGTAGGTATAGGAGGTTT |
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AgOr49 |
AgOr49 5' |
GTGCTGATGTGTTGCCTGTT |
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AgOr49 3' |
GATAGTATGAGAATATGGCTTTTAGCA |
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AgOr50 |
AgOr50.1 |
CGTCAATCTGTCCATCTACA |
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AgOr50.2 |
TACTTGATCGTGGACAGGAT |
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AgOr51 |
AgOr51_1193rev |
TAGAGGGCATCCTTCAGCAC |
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AgOr51_764fwd |
TACATCAGCGGACACTCGAC |
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AgOr52 |
AgOr52.1 |
TCAACTTCGTCGTGTACGA |
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AgOr52.2 |
AGCACTGAGAAGATTGACAC |
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AgOr53 |
AgOr53.1 |
TGTCGTTTATCTGTGTTTGC |
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AgOr53.2 |
CAGAACGGATAGGTTTAGTG |
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AgOr54 |
AgOr54.1 |
AAAACGCTCATCCTGCAGAT |
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AgOr54.2 |
ATTTTGGGAAGCCATCAGCA |
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AgOr55 |
AgOr55.1 |
GGAATTGCCAATGGAGAAAC |
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AgOr55.2 |
CTGTTCGAGTTTGGTATTGC |
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AgOr56 |
AgOr56.3 |
CCTAGCTGGTTGTTTCTTGT |
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AgOr56.4 |
TTGATGCGAAAGCTCGTTGA |
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AgOr57 |
AgOr57.1 |
CCACTAATATGGCTTATCCC |
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AgOr57.2 |
ATTGATGCGAAAGCTCGTTG |
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AgOr58 |
AgOr58.1 |
TCGCTTGAGTTCTACTGGTT |
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AgOr58.2 |
ATAACTGAACTGTAGCACGG |
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AgOr59 |
AgOr59.1 |
CTGCTGCTGATGCTAATCTT |
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AgOr59.2 |
GGATACTCACTGAGCACAAT |
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AgOr60 |
AgOr60.1 |
TCGTTGTACGTGCTGATCTT |
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AgOr60.4 |
TGATGATCAGAAAGCTTGCC |
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AgOr61 |
AgOr61 5' |
CGCTATACAGGGCTTGTCCA |
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AgOr61 3' |
AAGGAACGCTACGCATTTGT |
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AgOr62 |
AgOr62 5' |
GGCTGCAGCAGTTTCTGAAC |
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AgOr62 3' |
AACTGCAGCATGAACGTCAG |
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AgOr63 |
AgOr63 5' |
GGGATGTACTGCATGGGTTT |
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AgOr63 3' |
CTGCAGCAAAAACGTTAGCA |
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AgOr64 |
AgOr64 5' |
GCTGGCCAGTACTCGCTGTA |
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AgOr64 3' |
CGTCGATGGAACTGGATGAT |
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AgOr65 |
AgOr65 5' |
TTCATCGACTGCAAATACAGC |
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AgOr65 3' |
TGCCAAATACGAGTAGGATGTTT |
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AgOr66/67 |
AgOr66/67
5' |
TGTTTGTGGTGCATTTCGTT |
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AgOr66/67
3' |
CTGCTTCTGCTCTTCGGTTG |
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AgOr68 |
AgOr68 5'
2 |
GGTTATCAGACGCGCAACTC |
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AgOr68 3'
2 |
ACCAAGGGAAATGCATCAAA |
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AgOr69 |
AgOr69 5' |
GGCAGCTATTACAACCACTAATCTT |
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AgOr69 3' |
ATTTTCATAGCGCTGCAGGA |
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AgOr70 |
AgOr70 5' |
CCATCGAGAGCTTTCGTAAAT |
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AgOr70 3' |
TTCTATTTTTATTTTGCTCAAACACTT |
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AgOr71 |
AgOr71 5' |
CGTAAATTGATGAAATCTCTGATTG |
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AgOr71 3' |
TGTTCCAGTTCAGCGGTAAAT |
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AgOr72 |
AgOr72 5' |
TTGAGGGCTTTCGTAAATTGAT |
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AgOr72 3' |
CCCATTTTGATAACGTTTAAGCA |
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AgOr73 |
AgOr73 5' |
TTCGTAAATTGATGAAATCTCTGA |
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AgOr73 3' |
GCTCCAGTTCCACGGTAAAT |
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AgOr74 |
AgOr74 5' |
TGAAATCTCTGATTGTGTACTCG |
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AgOr74 3' |
CCATTTTGATAACGTTGAAGCA |
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AgOr75/76 |
AgOr75.1 |
GCCACTTCAATGTTGGACAT |
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AgOr75.2 |
AGACTGTTACCGTGAGCGA |
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AgOR77 |
AgOr12.1
5' |
CATTAAGTCACTCGGCAACG |
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AgOr12.1
3' |
TCTTTCAGCTGGGGACGATA |
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AgOr78/79 |
AgOr78.1 |
GCCGTATATAGTCAAACTAC |
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AgOr78.2 |
GCAATAACCATTGCAACCGT |
Rps7
S7-NF (19) 5’-TGCACCTGGATAAGAACCA-3’
S7-NR (18) 5’-GTAACGTCACGGCCAGTC-3’
S7-NP (32), 5’ (6’FAM)-ACCATCGAACACAAAGTTGACACTTTTGCGTC-3’ (BHQ)
AgOR7 (1363~1431, 69 bp, 191 bp)
Or7-F (19), 5'-ACCGTTTCGCTCGATCTGT-3'
Or7-R (18), 5'-CTGCACCAGCACCATGAA-3'
AgOr7-P (30), 5' (6'-FAM)-TAGGTGACAACGGCTCCAAGAACCGAAGCA-3' (BHQ)
AgOR3 (909~1103, 195 bp, 273 bp)
Or3-F’ (21), GACGGTGGAAACTTACGGCTA
Or3-R’ (21), GCCACATTGACGAAGCGAAAC
AgOR4 (861~1049, 189 bp, 255 bp)
Or4-F’ (21), TCTAACGAACGTGGGCATCTC
Or4-R’ (21), ATCCTAATGCTGCTGCGAAAG
AgOR6 (848~940, 93 bp, 581 bp)
Or6-F (21), TCGGCAGCTCCATCATAATCT
Or6-R (21), AGCACAGCATGAAGAGGACAA
AgOR12 (1098~1184, 87 bp, 154 bp)
Or12-F (21), GATTACAGCGTGGGGCATTAT
Or12-R (22), TTTAGCACGAGAAGAACGGTGT
AgOR13 (824~986, 163 bp, 304 bp)
Or13-5’ (20), TGATCTGGAGCTCAATGCTG
Or13-3’ (20), TAAACGGTATGTGCCACACG
AgOR14 (949~1053, 105 bp, 193 bp)
Or14-F (21), CTTGCGATACTGTTCGTCGTC
Or14-R (21), ACCGTACACGCTTTTCGAGAG
AgOR15 (1050~1153, 104 bp, 173 bp)
Or15-F’ (21), TCAAAGTCCAGTTGGCATCAC
Or15-R’ (21), CCCGCAATATCACAAAGAACG
AgOR16 (844~989, 146 bp, 209 bp)
Or16-F (21), ACCGTGGCGGGATTTAATACA
Or16-R (21), CATCTGCAGTCGTACACAACA
AgOR17 (911~1000, 90 bp, 165 bp)
Or17-F’ (21), CGGAAACCTTTGCCTACTGTT
Or17-R’ (21), GCTCCCAGCCGTTTTTGTAAA
AgOR18 (831~966, 136 bp, 210 bp)
Or18-F (21), TGTGCTGTGCATCTTGATCTG
Or18-R (21), CGTTCCGAGATAGCAATAGCC
AgOR19 (1098~1183, 86 bp, not clear)
Or19-F (20), GATTACAGCGTGGGGCATTA
Or19-R (21), TTAGCACGAGAAGAACGGTGT
AgOR20 (960~1157, 198 bp, 198 bp)
Or20-F (21), CTGTTTCTTCTGCACCGAACT
Or20-R (21), GTCTTAACGACCTTGGCAAAC
AgOR21 (945~1058, 114 bp, 114 bp)
Or21-F’ (21), TGGCTACTGCTTTTTCTGCAC
Or21-R’ (21), ATCGCCACCATTTTCTGTACC
AgOR26 (1013~1149, 137 bp, 137 bp)
Or26-F (22), GCAAATGGTATGAGGAGGATGT
Or26-R (22), CTGTTTCATTACCTGGGTGAAG
AgOR28 (1133~1260, 128 bp, 195 bp)
Or28-F’ (21), TGGTTAAAGCCCAGAAGCCTA
Or28-R’ (23), TTGCTGATTGATGGTTTGCAGTA
AgOR29 (852~977, 126 bp, 186 bp)
Or29-F’ (21), GATGGGGTTTGACTCCAGAAT
Or29-R’ (19), AGCGCCATCAGGACCTCTT
AgOR32 (1058~1144, 87 bp, 170 bp)
Or32-F (21), CATCCTTGCCGACACTGAAAA
Or32-R (21), TCTCGTTCAAGTCAGCCTCAA
AgOR39 (1075~1198, 124 bp, 194 bp)
Or39-F’ (20), CGCAACACTCGCCATCTTAT
Or39-R’ (21), ACGATGAAGCTGTACGAACGA
AgOR53 (861~1043, 183 bp, 242 bp)
Or53-F (21), GCGTGTTCTGAGTGTGGTGTT
Or53-R (21), TGCGAGCGTCGTATCATTAGT
AgOR55 (747~823, 77 bp, 77 bp)
Or55-F (21), CATGCTGATGCAGATTGTCCT
Or55-R (21), CGCTCATAGTCGGGAATGTAA
AgOR56 (841~964, 124 bp, 535 bp)
Or56-F (21), TTGGCTCTGTGTCTGGGTATG
Or56-R (21), TGCCGAGGTAAGAGAAGGAAA
AgOR57 (1059~1197, 139 bp, 208 bp)
Or57-F’ (21), CTTGATGATGCGAGCAAAGAG
Or57-R’ (21), CATTGTGTCGTCCAAAACCTG
AgOR62 (957~1084, 128 bp, 201 bp)
Or62-F’ (21), TCTGATCCTGGAATCCTTGCT
Or62-R’ (21), GTCGGTAGTGGATGGAAAAGC
AgOR70 (995~1160, 166 bp, 227 bp)
Or70-F (21), AGCTCCCAGTGAAGGAACAGA
Or70-R (21), CAGCCAACATACTGCATGACC
AgOR71 (1037~1127, 91 bp, 154 bp)
Or71-F (21), GCAGACAGCAATATCCGATGA
Or71-R (21), TGGTACAGACGCTTCAACACA
AgOR73 (914~1051, 138 bp, 198 bp)
Or73-F’ (21), CAGGGTTCTTTGTGATTGGTC
Or73-R’ (21), GACATTGCTGACGGCTCAATA